HL_5OT7_022

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGGGUGAAAGCCUG

Length

14 nucleotides

Bulged bases

5OT7|1|1|A|1014, 5OT7|1|1|C|1018

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OT7|1|1|C|1008
5OT7|1|1|G|1009
5OT7|1|1|G|1010
5OT7|1|1|G|1011
5OT7|1|1|U|1012
5OT7|1|1|G|1013
5OT7|1|1|A|1014
5OT7|1|1|A|1015
5OT7|1|1|A|1016
5OT7|1|1|G|1017
5OT7|1|1|C|1018
5OT7|1|1|C|1019
5OT7|1|1|U|1020
5OT7|1|1|G|1021

Current chains

Chain 1

16S Ribosomal RNA

Nearby chains

Chain R

30S ribosomal protein S19

Chain Z

50S ribosomal protein L31