HL_5OT7_046

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAGAG

Length

5 nucleotides

Bulged bases

5OT7|1|4|G|321, 5OT7|1|4|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5OT7_046 not in the Motif Atlas

Homologous match to HL_4WF9_011

Geometric discrepancy: 0.1012

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

5OT7|1|4|C|319
5OT7|1|4|A|320
5OT7|1|4|G|321
5OT7|1|4|A|322
5OT7|1|4|G|323

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains

Chain i

50S ribosomal protein L4

Chain z

50S ribosomal protein L24