HL_5OT7_060

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUUAGGG

Length

8 nucleotides

Bulged bases

5OT7|1|4|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5OT7_060 not in the Motif Atlas

Geometric match to HL_7KI3_001

Geometric discrepancy: 0.2431

The information below is about HL_7KI3_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

5OT7|1|4|C|825
5OT7|1|4|U|826
5OT7|1|4|U|827
5OT7|1|4|U|828
5OT7|1|4|A|829
5OT7|1|4|G|830
5OT7|1|4|G|831
5OT7|1|4|G|832

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L27

Chain q

50S ribosomal protein L15