HL_5OT7_063

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5OT7_063 not in the Motif Atlas

Homologous match to HL_7RQB_028

Geometric discrepancy: 0.1628

The information below is about HL_7RQB_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

5OT7|1|4|G|978
5OT7|1|4|G|979
5OT7|1|4|A|980
5OT7|1|4|A|981
5OT7|1|4|C|982
5OT7|1|4|A|983
5OT7|1|4|A|984
5OT7|1|4|C|985

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains

Chain Y

50S ribosomal protein L30

Chain v

50S ribosomal protein L20