HL_5OT7_091

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

5OT7|1|4|G|2307, 5OT7|1|4|A|2311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5OT7_091 not in the Motif Atlas

Homologous match to HL_4WF9_051

Geometric discrepancy: 0.4435

The information below is about HL_4WF9_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OT7|1|4|G|2303
5OT7|1|4|G|2304
5OT7|1|4|A|2305
5OT7|1|4|C|2306
5OT7|1|4|G|2307
5OT7|1|4|G|2308
5OT7|1|4|A|2309
5OT7|1|4|A|2310
5OT7|1|4|A|2311
5OT7|1|4|U|2312
5OT7|1|4|C|2313

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains

Chain j

50S ribosomal protein L5