HL_5OT7_092
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGCAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OT7_092 not in the Motif Atlas
- Homologous match to HL_7RQB_056
- Geometric discrepancy: 0.1855
- The information below is about HL_7RQB_056
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_12078.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
5OT7|1|4|C|2324
5OT7|1|4|G|2325
5OT7|1|4|C|2326
5OT7|1|4|A|2327
5OT7|1|4|A|2328
5OT7|1|4|G|2329
5OT7|1|4|G|2330
5OT7|1|4|G|2331
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain V
- 50S ribosomal protein L27
- Chain b
- 50S ribosomal protein L33
- Chain j
- 50S ribosomal protein L5
- Chain r
- 50S ribosomal protein L16
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