HL_5OT7_093
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCUGCAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OT7_093 not in the Motif Atlas
- Homologous match to HL_7A0S_056
- Geometric discrepancy: 0.1868
- The information below is about HL_7A0S_056
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_87268.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
5OT7|1|4|C|2355
5OT7|1|4|C|2356
5OT7|1|4|U|2357
5OT7|1|4|G|2358
5OT7|1|4|C|2359
5OT7|1|4|A|2360
5OT7|1|4|A|2361
5OT7|1|4|G|2362
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain V
- 50S ribosomal protein L27
- Chain d
- 50S ribosomal protein L35
- Chain q
- 50S ribosomal protein L15
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