HL_5OT7_096
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUCCACAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OT7_096 not in the Motif Atlas
- Homologous match to HL_5J7L_193
- Geometric discrepancy: 0.1712
- The information below is about HL_5J7L_193
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32735.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
5OT7|1|4|C|2471
5OT7|1|4|G|2472
5OT7|1|4|U|2473
5OT7|1|4|C|2474
5OT7|1|4|C|2475
5OT7|1|4|A|2476
5OT7|1|4|C|2477
5OT7|1|4|A|2478
5OT7|1|4|G|2479
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain U
- Elongation factor G
- Chain e
- 50S ribosomal protein L36
- Chain k
- 50S ribosomal protein L6
- Chain r
- 50S ribosomal protein L16
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