HL_5T2A_050

3D structure

PDB id

5T2A (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGGUCAAAAUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2A|1|A|G|520
5T2A|1|A|G|521
5T2A|1|A|G|522
5T2A|1|A|G|523
5T2A|1|A|U|524
5T2A|1|A|C|525
5T2A|1|A|A|526
5T2A|1|A|A|527
5T2A|1|A|A|528
5T2A|1|A|A|529
5T2A|1|A|U|530
5T2A|1|A|C|531

Current chains

Chain A

LSU-alpha

Nearby chains

Chain N

eL14

Chain Q

eL20