HL_5T2C_014

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCCCUCCCGGCGCGCCGGGGGG

Length

22 nucleotides

Bulged bases

5T2C|1|A|C|991, 5T2C|1|A|C|1047

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|C|985
5T2C|1|A|C|986
5T2C|1|A|C|987
5T2C|1|A|C|988
5T2C|1|A|U|989
5T2C|1|A|C|990
5T2C|1|A|C|991
5T2C|1|A|C|992
5T2C|1|A|G|993
5T2C|1|A|G|994
5T2C|1|A|C|995
5T2C|1|A|G|996
5T2C|1|A|C|1047
5T2C|1|A|G|1048
5T2C|1|A|C|1049
5T2C|1|A|C|1050
5T2C|1|A|G|1051
5T2C|1|A|G|1064
5T2C|1|A|G|1065
5T2C|1|A|G|1066
5T2C|1|A|G|1067
5T2C|1|A|G|1068

Current chains

Chain A

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L6