HL_5T2C_015

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGC

Length

20 nucleotides

Bulged bases

5T2C|1|A|C|1182

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|1171
5T2C|1|A|C|1172
5T2C|1|A|G|1173
5T2C|1|A|G|1174
5T2C|1|A|A|1175
5T2C|1|A|C|1176
5T2C|1|A|U|1177
5T2C|1|A|G|1178
5T2C|1|A|U|1179
5T2C|1|A|C|1180
5T2C|1|A|C|1181
5T2C|1|A|C|1182
5T2C|1|A|C|1183
5T2C|1|A|A|1184
5T2C|1|A|G|1185
5T2C|1|A|U|1186
5T2C|1|A|G|1187
5T2C|1|A|C|1188
5T2C|1|A|G|1189
5T2C|1|A|C|1190

Current chains

Chain A

28S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain G

60S ribosomal protein L5

Chain p

60S ribosomal protein L10-like