HL_5T2C_021

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

5T2C|1|A|C|1439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|C|1436
5T2C|1|A|C|1437
5T2C|1|A|U|1438
5T2C|1|A|C|1439
5T2C|1|A|U|1440
5T2C|1|A|C|1441
5T2C|1|A|C|1442
5T2C|1|A|A|1443
5T2C|1|A|G|1444
5T2C|1|A|U|1445
5T2C|1|A|C|1446
5T2C|1|A|C|1447
5T2C|1|A|G|1448

Current chains

Chain A

28S rRNA

Nearby chains

Chain F

60S ribosomal protein L4

Chain K

60S ribosomal protein L18

Chain m

60S ribosomal protein L7