HL_5T2C_022

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCCGCGCC

Length

8 nucleotides

Bulged bases

5T2C|1|A|C|1481, 5T2C|1|A|C|1485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|1479
5T2C|1|A|C|1480
5T2C|1|A|C|1481
5T2C|1|A|G|1482
5T2C|1|A|C|1483
5T2C|1|A|G|1484
5T2C|1|A|C|1485
5T2C|1|A|C|1486

Current chains

Chain A

28S rRNA

Nearby chains

Chain c

60S ribosomal protein L36

Chain r

60S ribosomal protein L13