HL_5T2C_024

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACGUGCAAAUC

Length

12 nucleotides

Bulged bases

5T2C|1|A|U|1596, 5T2C|1|A|A|1600

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|1592
5T2C|1|A|A|1593
5T2C|1|A|C|1594
5T2C|1|A|G|1595
5T2C|1|A|U|1596
5T2C|1|A|G|1597
5T2C|1|A|C|1598
5T2C|1|A|A|1599
5T2C|1|A|A|1600
5T2C|1|A|A|1601
5T2C|1|A|U|1602
5T2C|1|A|C|1603

Current chains

Chain A

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L3

Chain F

60S ribosomal protein L4

Chain J

60S ribosomal protein L17

Chain d

60S ribosomal protein L37