HL_5T2C_032
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCGCGCCCGCCCCCGGAGCCCCGCGGACGCUACG
- Length
- 73 nucleotides
- Bulged bases
- 5T2C|1|A|G|2089, 5T2C|1|A|A|2093, 5T2C|1|A|G|2111, 5T2C|1|A|G|2114, 5T2C|1|A|C|2116, 5T2C|1|A|C|2119, 5T2C|1|A|G|2122, 5T2C|1|A|G|2254, 5T2C|1|A|C|2256, 5T2C|1|A|C|2257, 5T2C|1|A|G|2259, 5T2C|1|A|C|2264, 5T2C|1|A|U|2267, 5T2C|1|A|C|2269
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|C|2087
5T2C|1|A|A|2088
5T2C|1|A|G|2089
5T2C|1|A|U|2090
5T2C|1|A|C|2091
5T2C|1|A|G|2092
5T2C|1|A|A|2093
5T2C|1|A|G|2094
5T2C|1|A|A|2095
5T2C|1|A|G|2096
5T2C|1|A|U|2097
5T2C|1|A|G|2098
5T2C|1|A|G|2099
5T2C|1|A|A|2100
5T2C|1|A|C|2101
5T2C|1|A|G|2102
5T2C|1|A|G|2103
5T2C|1|A|G|2104
5T2C|1|A|A|2105
5T2C|1|A|G|2106
5T2C|1|A|C|2107
5T2C|1|A|G|2108
5T2C|1|A|G|2109
5T2C|1|A|C|2110
5T2C|1|A|G|2111
5T2C|1|A|G|2112
5T2C|1|A|G|2113
5T2C|1|A|G|2114
5T2C|1|A|G|2115
5T2C|1|A|C|2116
5T2C|1|A|G|2117
5T2C|1|A|G|2118
5T2C|1|A|C|2119
5T2C|1|A|G|2120
5T2C|1|A|C|2121
5T2C|1|A|G|2122
5T2C|1|A|C|2123
5T2C|1|A|G|2124
5T2C|1|A|C|2125
5T2C|1|A|G|2126
5T2C|1|A|C|2127
5T2C|1|A|G|2128
5T2C|1|A|C|2129
5T2C|1|A|G|2130
5T2C|1|A|C|2131
5T2C|1|A|C|2243
5T2C|1|A|C|2244
5T2C|1|A|G|2245
5T2C|1|A|C|2246
5T2C|1|A|C|2247
5T2C|1|A|C|2248
5T2C|1|A|C|2249
5T2C|1|A|C|2250
5T2C|1|A|G|2251
5T2C|1|A|G|2252
5T2C|1|A|A|2253
5T2C|1|A|G|2254
5T2C|1|A|C|2255
5T2C|1|A|C|2256
5T2C|1|A|C|2257
5T2C|1|A|C|2258
5T2C|1|A|G|2259
5T2C|1|A|C|2260
5T2C|1|A|G|2261
5T2C|1|A|G|2262
5T2C|1|A|A|2263
5T2C|1|A|C|2264
5T2C|1|A|G|2265
5T2C|1|A|C|2266
5T2C|1|A|U|2267
5T2C|1|A|A|2268
5T2C|1|A|C|2269
5T2C|1|A|G|2270
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4
- Chain H
- 60S ribosomal protein L6
- Chain K
- 60S ribosomal protein L18
- Chain k
- 60S ribosomal protein L28
- Chain m
- 60S ribosomal protein L7
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