HL_5T2C_053

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAGUAACUAUGACUC

Length

15 nucleotides

Bulged bases

5T2C|1|A|A|3766

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|3755
5T2C|1|A|A|3756
5T2C|1|A|G|3757
5T2C|1|A|U|3758
5T2C|1|A|A|3759
5T2C|1|A|A|3760
5T2C|1|A|C|3761
5T2C|1|A|U|3762
5T2C|1|A|A|3763
5T2C|1|A|U|3764
5T2C|1|A|G|3765
5T2C|1|A|A|3766
5T2C|1|A|C|3767
5T2C|1|A|U|3768
5T2C|1|A|C|3769

Current chains

Chain A

28S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA