HL_5T2C_080

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCCUUCGCGGGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|C|194
5T2C|1|AA|C|195
5T2C|1|AA|C|196
5T2C|1|AA|U|197
5T2C|1|AA|U|198
5T2C|1|AA|C|199
5T2C|1|AA|G|200
5T2C|1|AA|C|201
5T2C|1|AA|G|202
5T2C|1|AA|G|203
5T2C|1|AA|G|204
5T2C|1|AA|G|205

Current chains

Chain AA

18S rRNA

Nearby chains

Chain Au

40S ribosomal protein S8