HL_5T2C_085

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGCCUGAGAAACGGCU

Length

16 nucleotides

Bulged bases

5T2C|1|AA|G|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|A|439
5T2C|1|AA|G|440
5T2C|1|AA|C|441
5T2C|1|AA|C|442
5T2C|1|AA|U|443
5T2C|1|AA|G|444
5T2C|1|AA|A|445
5T2C|1|AA|G|446
5T2C|1|AA|A|447
5T2C|1|AA|A|448
5T2C|1|AA|A|449
5T2C|1|AA|C|450
5T2C|1|AA|G|451
5T2C|1|AA|G|452
5T2C|1|AA|C|453
5T2C|1|AA|U|454

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AK

40S ribosomal protein S6

Chain AQ

40S ribosomal protein S24

Chain Ar

40S ribosomal protein S4, X isoform

Chain Au

40S ribosomal protein S8