HL_5T2C_088

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGACUCUUUCGAGGCC

Length

16 nucleotides

Bulged bases

5T2C|1|AA|U|541

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|G|534
5T2C|1|AA|G|535
5T2C|1|AA|A|536
5T2C|1|AA|C|537
5T2C|1|AA|U|538
5T2C|1|AA|C|539
5T2C|1|AA|U|540
5T2C|1|AA|U|541
5T2C|1|AA|U|542
5T2C|1|AA|C|543
5T2C|1|AA|G|544
5T2C|1|AA|A|545
5T2C|1|AA|G|546
5T2C|1|AA|G|547
5T2C|1|AA|C|548
5T2C|1|AA|C|549

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AT

40S ribosomal protein S30