HL_5T2C_089

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UCCACUUUAAAUCCUUCCG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|U|566
5T2C|1|AA|C|567
5T2C|1|AA|C|568
5T2C|1|AA|A|569
5T2C|1|AA|C|570
5T2C|1|AA|U|571
5T2C|1|AA|U|572
5T2C|1|AA|U|573
5T2C|1|AA|A|574
5T2C|1|AA|A|575
5T2C|1|AA|A|576
5T2C|1|AA|U|577
5T2C|1|AA|C|578
5T2C|1|AA|C|579
5T2C|1|AA|U|580
5T2C|1|AA|U|581
5T2C|1|AA|C|582
5T2C|1|AA|C|583
5T2C|1|AA|G|584

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AL

40S ribosomal protein S9

Chain AQ

40S ribosomal protein S24

Chain Ar

40S ribosomal protein S4, X isoform