HL_5T2C_096

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAUUCCCAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|U|1112
5T2C|1|AA|A|1113
5T2C|1|AA|U|1114
5T2C|1|AA|U|1115
5T2C|1|AA|C|1116
5T2C|1|AA|C|1117
5T2C|1|AA|C|1118
5T2C|1|AA|A|1119
5T2C|1|AA|U|1120
5T2C|1|AA|G|1121

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AV

40S ribosomal protein S27

Chain Ap

40S ribosomal protein S3a