HL_5T2C_106

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGUCAUAAGCUU

Length

13 nucleotides

Bulged bases

5T2C|1|AA|G|1665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|G|1656
5T2C|1|AA|G|1657
5T2C|1|AA|G|1658
5T2C|1|AA|U|1659
5T2C|1|AA|C|1660
5T2C|1|AA|A|1661
5T2C|1|AA|U|1662
5T2C|1|AA|A|1663
5T2C|1|AA|A|1664
5T2C|1|AA|G|1665
5T2C|1|AA|C|1666
5T2C|1|AA|U|1667
5T2C|1|AA|U|1668

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AB

40S ribosomal protein S20

Chain AG

40S ribosomal protein S29

Chain AU

40S ribosomal protein S19

Chain Ay

40S ribosomal protein S16