HL_5T2C_126

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGGUUAAUUCCG

Length

13 nucleotides

Bulged bases

5T2C|1|AA|U|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|C|1363
5T2C|1|AA|U|1364
5T2C|1|AA|G|1365
5T2C|1|AA|G|1366
5T2C|1|AA|U|1367
5T2C|1|AA|U|1368
5T2C|1|AA|A|1369
5T2C|1|AA|A|1370
5T2C|1|AA|U|1371
5T2C|1|AA|U|1372
5T2C|1|AA|C|1373
5T2C|1|AA|C|1374
5T2C|1|AA|G|1375

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AE

40S ribosomal protein S26

Chain Ao

40S ribosomal protein SA

Chain Az

40S ribosomal protein S17