HL_5T2C_134
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUCUUGGGGCCGAAACGAUCUCAAC
- Length
- 25 nucleotides
- Bulged bases
- 5T2C|1|A|U|1754, 5T2C|1|A|C|1755, 5T2C|1|A|U|1756, 5T2C|1|A|C|1762, 5T2C|1|A|A|1765, 5T2C|1|A|A|1766, 5T2C|1|A|A|1767, 5T2C|1|A|G|1769
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|G|1753
5T2C|1|A|U|1754
5T2C|1|A|C|1755
5T2C|1|A|U|1756
5T2C|1|A|U|1757
5T2C|1|A|G|1758
5T2C|1|A|G|1759
5T2C|1|A|G|1760
5T2C|1|A|G|1761
5T2C|1|A|C|1762
5T2C|1|A|C|1763
5T2C|1|A|G|1764
5T2C|1|A|A|1765
5T2C|1|A|A|1766
5T2C|1|A|A|1767
5T2C|1|A|C|1768
5T2C|1|A|G|1769
5T2C|1|A|A|1770
5T2C|1|A|U|1771
5T2C|1|A|C|1772
5T2C|1|A|U|1773
5T2C|1|A|C|1774
5T2C|1|A|A|1775
5T2C|1|A|A|1776
5T2C|1|A|C|1777
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain A0
- 40S ribosomal protein S18
- Chain Ax
- 40S ribosomal protein S15
- Chain G
- 60S ribosomal protein L5
- Chain p
- 60S ribosomal protein L10-like
Coloring options: