HL_5T2C_136

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUGGUAAUUCUAGA

Length

15 nucleotides

Bulged bases

5T2C|1|AA|U|154, 5T2C|1|AA|U|161

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|U|152
5T2C|1|AA|G|153
5T2C|1|AA|U|154
5T2C|1|AA|G|155
5T2C|1|AA|G|156
5T2C|1|AA|U|157
5T2C|1|AA|A|158
5T2C|1|AA|A|159
5T2C|1|AA|U|160
5T2C|1|AA|U|161
5T2C|1|AA|C|162
5T2C|1|AA|U|163
5T2C|1|AA|A|164
5T2C|1|AA|G|165
5T2C|1|AA|A|166

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AK

40S ribosomal protein S6

Chain AQ

40S ribosomal protein S24