HL_5T2C_137

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CACGCCCCCCGUGGCGG

Length

17 nucleotides

Bulged bases

5T2C|1|AA|C|321, 5T2C|1|AA|C|324

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|C|317
5T2C|1|AA|A|318
5T2C|1|AA|C|319
5T2C|1|AA|G|320
5T2C|1|AA|C|321
5T2C|1|AA|C|322
5T2C|1|AA|C|323
5T2C|1|AA|C|324
5T2C|1|AA|C|325
5T2C|1|AA|C|326
5T2C|1|AA|G|327
5T2C|1|AA|U|328
5T2C|1|AA|G|329
5T2C|1|AA|G|330
5T2C|1|AA|C|331
5T2C|1|AA|G|332
5T2C|1|AA|G|333

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AK

40S ribosomal protein S6

Chain Ar

40S ribosomal protein S4, X isoform