HL_5T7V_019

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAGCAACGC

Length

10 nucleotides

Bulged bases

5T7V|1|A|G|980

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_019 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.183

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

5T7V|1|A|G|972
5T7V|1|A|A|973
5T7V|1|A|A|974
5T7V|1|A|G|975
5T7V|1|A|C|976
5T7V|1|A|A|977
5T7V|1|A|A|978
5T7V|1|A|C|979
5T7V|1|A|G|980
5T7V|1|A|C|981

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain S1

30S ribosomal protein S10