HL_5T7V_031

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGUUAUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_031 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.2837

The information below is about HL_4WF9_004

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.1

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

5T7V|1|B|A|136
5T7V|1|B|G|137
5T7V|1|B|U|138
5T7V|1|B|U|139
5T7V|1|B|A|140
5T7V|1|B|U|141
5T7V|1|B|G|142
5T7V|1|B|U|143

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L6

50S ribosomal protein L23