HL_5T7V_078

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

5T7V|1|B|A|2295, 5T7V|1|B|C|2302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_078 not in the Motif Atlas

Homologous match to HL_4WF9_050

Geometric discrepancy: 0.1238

The information below is about HL_4WF9_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

5T7V|1|B|C|2291
5T7V|1|B|U|2292
5T7V|1|B|A|2293
5T7V|1|B|A|2294
5T7V|1|B|A|2295
5T7V|1|B|A|2296
5T7V|1|B|G|2297
5T7V|1|B|G|2298
5T7V|1|B|U|2299
5T7V|1|B|A|2300
5T7V|1|B|A|2301
5T7V|1|B|C|2302
5T7V|1|B|G|2303

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L9

50S ribosomal protein L27

Chain LP

50S ribosomal protein L16