HL_5T7V_079

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGGUUGGAAAUCA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_079 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.2097

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

5T7V|1|B|U|2329
5T7V|1|B|G|2330
5T7V|1|B|G|2331
5T7V|1|B|U|2332
5T7V|1|B|U|2333
5T7V|1|B|G|2334
5T7V|1|B|G|2335
5T7V|1|B|A|2336
5T7V|1|B|A|2337
5T7V|1|B|A|2338
5T7V|1|B|U|2339
5T7V|1|B|C|2340
5T7V|1|B|A|2341

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain C

5S ribosomal RNA; 5S rRNA