HL_5T7V_090

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

5T7V|1|B|G|2778

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5T7V_090 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1565

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

5T7V|1|B|C|2772
5T7V|1|B|U|2773
5T7V|1|B|G|2774
5T7V|1|B|A|2775
5T7V|1|B|A|2776
5T7V|1|B|A|2777
5T7V|1|B|G|2778
5T7V|1|B|C|2779
5T7V|1|B|A|2780
5T7V|1|B|U|2781
5T7V|1|B|C|2782
5T7V|1|B|U|2783
5T7V|1|B|A|2784
5T7V|1|B|A|2785
5T7V|1|B|G|2786

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LI

50S ribosomal protein L36

Chain LL

50S ribosomal protein L6

Chain LM

50S ribosomal protein L13