HL_5TBW_004

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUCG

Length

5 nucleotides

Bulged bases

5TBW|1|1|U|133, 5TBW|1|1|C|135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

5TBW|1|1|C|132
5TBW|1|1|U|133
5TBW|1|1|U|134
5TBW|1|1|C|135
5TBW|1|1|G|136

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AI

60S ribosomal protein L35-A

Chain AR

Large subunit ribosomal RNA; LSU rRNA

Chain DA

60S ribosomal protein L26-A

Chain v

60S ribosomal protein L15-A