3D structure

PDB id
5TBW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUUAAUUG
Length
8 nucleotides
Bulged bases
5TBW|1|1|U|1081
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_77436.2
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
23

Unit IDs

5TBW|1|1|C|1076
5TBW|1|1|U|1077
5TBW|1|1|U|1078
5TBW|1|1|A|1079
5TBW|1|1|A|1080
5TBW|1|1|U|1081
5TBW|1|1|U|1082
5TBW|1|1|G|1083

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain 2
60S ribosomal protein L21-A
Chain AC
60S ribosomal protein L29
Chain m
60S ribosomal protein L5

Coloring options:

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