HL_5TBW_027

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases (A, C, G, U)

1245A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_07145.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

5TBW|1|1|C|1239
5TBW|1|1|A|1240
5TBW|1|1|U|1241
5TBW|1|1|G|1242
5TBW|1|1|G|1243
5TBW|1|1|A|1244
5TBW|1|1|A|1245
5TBW|1|1|G|1246
5TBW|1|1|U|1247
5TBW|1|1|C|1248
5TBW|1|1|G|1249

Current chains

Chain 1

25S ribosomal RNA

Nearby chains