HL_5TBW_041

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGCAGCAG

Length

8 nucleotides

Bulged bases (A, C, G, U)

1846C, 1848G, 1850A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.3

Basepair signature

cWW-F-F

Number of instances in this motif group

13

Unit IDs

5TBW|1|1|C|1844
5TBW|1|1|G|1845
5TBW|1|1|C|1846
5TBW|1|1|A|1847
5TBW|1|1|G|1848
5TBW|1|1|C|1849
5TBW|1|1|A|1850
5TBW|1|1|G|1851

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AK

60S ribosomal protein L37-A

Chain AM

60S ribosomal protein L39

Chain l

60S ribosomal protein L4-A

Chain x

60S ribosomal protein L17-A