HL_5TBW_099
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUUUUUAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TBW_099 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.2352
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
5TBW|1|A|U|1055
5TBW|1|A|U|1056
5TBW|1|A|U|1057
5TBW|1|A|U|1058
5TBW|1|A|U|1059
5TBW|1|A|U|1060
5TBW|1|A|A|1061
5TBW|1|A|A|1062
5TBW|1|A|U|1063
5TBW|1|A|G|1064
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain C
- 40S ribosomal protein S1-A
- Chain S
- 40S ribosomal protein S17-A
- Chain c
- 40S ribosomal protein S27-A
Coloring options: