HL_5TBW_113
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAAGCAUA
- Length
- 8 nucleotides
- Bulged bases
- 5TBW|1|AR|A|40
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TBW_113 not in the Motif Atlas
- Homologous match to HL_5TBW_001
- Geometric discrepancy: 0.0647
- The information below is about HL_5TBW_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36430.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
5TBW|1|AR|U|38
5TBW|1|AR|A|39
5TBW|1|AR|A|40
5TBW|1|AR|G|41
5TBW|1|AR|C|42
5TBW|1|AR|A|43
5TBW|1|AR|U|44
5TBW|1|AR|A|45
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CN
- 60S ribosomal protein L13-A
- Chain CP
- 60S ribosomal protein L15-A
- Chain DC
- 60S ribosomal protein L28
- Chain DQ
- 60S ribosomal protein L42-A
Coloring options: