HL_5TBW_126
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UCUUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- 5TBW|1|AR|C|648
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TBW_126 not in the Motif Atlas
- Homologous match to HL_5TBW_014
- Geometric discrepancy: 0.0474
- The information below is about HL_5TBW_014
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
5TBW|1|AR|U|640
5TBW|1|AR|C|641
5TBW|1|AR|U|642
5TBW|1|AR|U|643
5TBW|1|AR|G|644
5TBW|1|AR|A|645
5TBW|1|AR|A|646
5TBW|1|AR|A|647
5TBW|1|AR|C|648
5TBW|1|AR|A|649
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CE
- 60S ribosomal protein L3
- Chain DC
- 60S ribosomal protein L28
- Chain DG
- 60S ribosomal protein L32
Coloring options: