HL_5TBW_143
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUGAGAACU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TBW_143 not in the Motif Atlas
- Homologous match to HL_5TBW_031
- Geometric discrepancy: 0.0544
- The information below is about HL_5TBW_031
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
5TBW|1|AR|A|1462
5TBW|1|AR|U|1463
5TBW|1|AR|G|1464
5TBW|1|AR|A|1465
5TBW|1|AR|G|1466
5TBW|1|AR|A|1467
5TBW|1|AR|A|1468
5TBW|1|AR|C|1469
5TBW|1|AR|U|1470
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CR
- 60S ribosomal protein L17-A
- Chain CT
- 60S ribosomal protein L19-A
- Chain DF
- 60S ribosomal protein L31-A
Coloring options: