HL_5TCU_005

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAACUGAGACACGGUC

Length

16 nucleotides

Bulged bases

5TCU|1|A|C|336, 5TCU|1|A|C|338, 5TCU|1|A|G|339

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|G|327
5TCU|1|A|A|328
5TCU|1|A|A|329
5TCU|1|A|C|330
5TCU|1|A|U|331
5TCU|1|A|G|332
5TCU|1|A|A|333
5TCU|1|A|G|334
5TCU|1|A|A|335
5TCU|1|A|C|336
5TCU|1|A|A|337
5TCU|1|A|C|338
5TCU|1|A|G|339
5TCU|1|A|G|340
5TCU|1|A|U|341
5TCU|1|A|C|342

Current chains

Chain A

16S RRNA

Nearby chains

Chain S7

30S ribosomal protein S16

Chain SA

30S ribosomal protein S20