HL_5TCU_019

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5TCU_019 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.3542

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

5TCU|1|A|C|1039
5TCU|1|A|U|1040
5TCU|1|A|U|1041
5TCU|1|A|C|1042
5TCU|1|A|G|1043
5TCU|1|A|G|1044

Current chains

Chain A

16S RRNA

Nearby chains