HL_5TCU_025

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UCUGCAACUCGA

Length

12 nucleotides

Bulged bases

5TCU|1|A|C|1328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|U|1324
5TCU|1|A|C|1325
5TCU|1|A|U|1326
5TCU|1|A|G|1327
5TCU|1|A|C|1328
5TCU|1|A|A|1329
5TCU|1|A|A|1330
5TCU|1|A|C|1331
5TCU|1|A|U|1332
5TCU|1|A|C|1333
5TCU|1|A|G|1334
5TCU|1|A|A|1335

Current chains

Chain A

16S RRNA

Nearby chains

Chain S4

30S ribosomal protein S13

Chain S5

30S ribosomal protein S14 type Z

Chain SI

30S ribosomal protein S19