HL_5TCU_026
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 5TCU|1|A|U|1375
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TCU_026 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.2797
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5TCU|1|A|G|1367
5TCU|1|A|A|1368
5TCU|1|A|U|1369
5TCU|1|A|C|1370
5TCU|1|A|A|1371
5TCU|1|A|G|1372
5TCU|1|A|C|1373
5TCU|1|A|A|1374
5TCU|1|A|U|1375
5TCU|1|A|G|1376
5TCU|1|A|C|1377
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain S1
- 30S ribosomal protein S10
- Chain S5
- 30S ribosomal protein S14 type Z
- Chain SH
- 30S ribosomal protein S9
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