HL_5TCU_034

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAGAACUGAAACAUCUUAGUACC

Length

23 nucleotides

Bulged bases

5TCU|1|B|A|199, 5TCU|1|B|A|202

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|G|190
5TCU|1|B|A|191
5TCU|1|B|G|192
5TCU|1|B|A|193
5TCU|1|B|A|194
5TCU|1|B|C|195
5TCU|1|B|U|196
5TCU|1|B|G|197
5TCU|1|B|A|198
5TCU|1|B|A|199
5TCU|1|B|A|200
5TCU|1|B|C|201
5TCU|1|B|A|202
5TCU|1|B|U|203
5TCU|1|B|C|204
5TCU|1|B|U|205
5TCU|1|B|U|206
5TCU|1|B|A|207
5TCU|1|B|G|208
5TCU|1|B|U|209
5TCU|1|B|A|210
5TCU|1|B|C|211
5TCU|1|B|C|212

Current chains

Chain B

23S RRNA

Nearby chains

Chain LA

50S ribosomal protein L28

Chain LG

50S ribosomal protein L34

Chain LO

50S ribosomal protein L15