HL_5TCU_041

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGGAGCACGUGAAAUUCCG

Length

19 nucleotides

Bulged bases

5TCU|1|B|G|432, 5TCU|1|B|A|435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|C|424
5TCU|1|B|G|425
5TCU|1|B|G|426
5TCU|1|B|A|427
5TCU|1|B|G|428
5TCU|1|B|C|429
5TCU|1|B|A|430
5TCU|1|B|C|431
5TCU|1|B|G|432
5TCU|1|B|U|433
5TCU|1|B|G|434
5TCU|1|B|A|435
5TCU|1|B|A|436
5TCU|1|B|A|437
5TCU|1|B|U|438
5TCU|1|B|U|439
5TCU|1|B|C|440
5TCU|1|B|C|441
5TCU|1|B|G|442

Current chains

Chain B

23S RRNA

Nearby chains

Chain D

Transfer RNA; tRNA

Chain LA

50S ribosomal protein L28