HL_5TCU_090

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGCUGAAAGCAUCUAAGCA

Length

19 nucleotides

Bulged bases

5TCU|1|B|G|2778

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|U|2770
5TCU|1|B|G|2771
5TCU|1|B|C|2772
5TCU|1|B|U|2773
5TCU|1|B|G|2774
5TCU|1|B|A|2775
5TCU|1|B|A|2776
5TCU|1|B|A|2777
5TCU|1|B|G|2778
5TCU|1|B|C|2779
5TCU|1|B|A|2780
5TCU|1|B|U|2781
5TCU|1|B|C|2782
5TCU|1|B|U|2783
5TCU|1|B|A|2784
5TCU|1|B|A|2785
5TCU|1|B|G|2786
5TCU|1|B|C|2787
5TCU|1|B|A|2788

Current chains

Chain B

23S RRNA

Nearby chains

Chain LI

50S ribosomal protein L36

Chain LL

50S ribosomal protein L6

Chain LM

50S ribosomal protein L13