HL_5TCU_103

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCCCUUCGGGGG

Length

12 nucleotides

Bulged bases

5TCU|1|A|U|1040, 5TCU|1|A|U|1041, 5TCU|1|A|C|1042

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|C|1036
5TCU|1|A|C|1037
5TCU|1|A|C|1038
5TCU|1|A|C|1039
5TCU|1|A|U|1040
5TCU|1|A|U|1041
5TCU|1|A|C|1042
5TCU|1|A|G|1043
5TCU|1|A|G|1044
5TCU|1|A|G|1045
5TCU|1|A|G|1046
5TCU|1|A|G|1047

Current chains

Chain A

16S RRNA

Nearby chains

Chain SB

30S ribosomal protein S3