HL_5TCU_110
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAAACAGCC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TCU_110 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.3253
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
5TCU|1|B|G|1021
5TCU|1|B|G|1022
5TCU|1|B|A|1023
5TCU|1|B|A|1024
5TCU|1|B|A|1025
5TCU|1|B|C|1026
5TCU|1|B|A|1027
5TCU|1|B|G|1028
5TCU|1|B|C|1029
5TCU|1|B|C|1030
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain C
- 5S ribosomal RNA; 5S rRNA
- Chain L3
- 50S ribosomal protein L20
- Chain L4
- 50S ribosomal protein L21
- Chain LD
- 50S ribosomal protein L30
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