HL_5TCU_114

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

ACCGUAAGGU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5TCU_114 not in the Motif Atlas

Geometric match to HL_8KAL_008

Geometric discrepancy: 0.391

The information below is about HL_8KAL_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

5TCU|1|B|A|1831
5TCU|1|B|C|1832
5TCU|1|B|C|1833
5TCU|1|B|G|1834
5TCU|1|B|U|1835
5TCU|1|B|A|1836
5TCU|1|B|A|1837
5TCU|1|B|G|1838
5TCU|1|B|G|1839
5TCU|1|B|U|1840

Current chains

Chain B

23S RRNA

Nearby chains

Chain L2

50S ribosomal protein L2

Chain LA

50S ribosomal protein L28