HL_5TCU_117

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CACUUAUCGUG

Length

11 nucleotides

Bulged bases

5TCU|1|B|U|2238, 5TCU|1|B|U|2240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|C|2234
5TCU|1|B|A|2235
5TCU|1|B|C|2236
5TCU|1|B|U|2237
5TCU|1|B|U|2238
5TCU|1|B|A|2239
5TCU|1|B|U|2240
5TCU|1|B|C|2241
5TCU|1|B|G|2242
5TCU|1|B|U|2243
5TCU|1|B|G|2244

Current chains

Chain B

23S RRNA

Nearby chains

Chain L2

50S ribosomal protein L2

Chain LA

50S ribosomal protein L28